GEOM Matcher
Protein structure  
PDB code OR
upload your own coordinates (PDB format)   Chain ID
Extract smotifs and calculate geometry  
DSSP alphabet Mininum size helix Mininum size beta
Search DB smotifs by geometry  
Database
Maximum variation in D (Ang) Maximum variation delta angle (degrees)
Maximum variation theta angle (degrees) Maximum variation rho angle (degrees)
Task  
1. Extract smotifs + assign geometry
2. 1 + perform search
3. 2 + structural alignment to query

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Please have a look at the help pages for more information about the server and the prediction method. Also, please read the disclaimer before using the server. Please note that we have recenlty updated our servers, please contact us if you experience any problems.